CovidFranceV1, Main, Exploration, bibRecord, 000242

Wide Diversity of Coronaviruses in Frugivorous and Insectivorous Bat Species: A Pilot Study in Guinea, West Africa.

Identifieur interne : 000242 ( Main/Exploration ); précédent : 000241; suivant : 000243

Wide Diversity of Coronaviruses in Frugivorous and Insectivorous Bat Species: A Pilot Study in Guinea, West Africa.

Auteurs : Audrey Lacroix [France] ; Nicole Vidal [France] ; Alpha K. Keita [France, Guinée] ; Guillaume Thaurignac [France] ; Amandine Esteban [France] ; Hélène De Nys [France, Zimbabwe] ; Ramadan Diallo [Guinée] ; Abdoulaye Toure [France, Guinée] ; Souana Goumou [Guinée] ; Abdoul Karim Soumah [Guinée] ; Moriba Povogui [Guinée] ; Joel Koivogui [Guinée] ; Jean-Louis Monemou [Guinée] ; Raisa Raulino [France] ; Antoine Nkuba [France] ; Vincent Foulongne [France] ; Eric Delaporte [France] ; Ahidjo Ayouba [France] ; Martine Peeters [France]

Source :

Viruses [ 1999-4915 ] ; 2020.

RBID : pubmed:32764506

Descripteurs français

KwdFr :
- Animaux (MeSH), Betacoronavirus (isolement et purification), Biodiversité (MeSH), Chiroptera (virologie), Coronavirus (classification), Coronavirus (génétique), Coronavirus (isolement et purification), Femelle (MeSH), Guinée (MeSH), Génome viral (MeSH), Humains (MeSH), Infections à coronavirus (médecine vétérinaire), Infections à coronavirus (virologie), Mâle (MeSH), Pandémies (MeSH), Phylogenèse (MeSH), Pneumopathie virale (médecine vétérinaire), Pneumopathie virale (virologie), Projets pilotes (MeSH), Zoonoses (virologie).
MESH :
- génétique : Coronavirus.
- isolement et purification : Betacoronavirus, Coronavirus.
- médecine vétérinaire : Infections à coronavirus, Pneumopathie virale.
- virologie : Chiroptera, Infections à coronavirus, Pneumopathie virale, Zoonoses.
- Animaux, Biodiversité, Coronavirus, Femelle, Guinée, Génome viral, Humains, Mâle, Pandémies, Phylogenèse, Projets pilotes.
Wicri :
- geographic : Guinée.

English descriptors

KwdEn :
- Animals (MeSH), Betacoronavirus (isolation & purification), Biodiversity (MeSH), Chiroptera (virology), Coronavirus (classification), Coronavirus (genetics), Coronavirus (isolation & purification), Coronavirus Infections (veterinary), Coronavirus Infections (virology), Female (MeSH), Genome, Viral (MeSH), Guinea (MeSH), Humans (MeSH), Male (MeSH), Pandemics (MeSH), Phylogeny (MeSH), Pilot Projects (MeSH), Pneumonia, Viral (veterinary), Pneumonia, Viral (virology), Zoonoses (virology).
MESH :
- geographic : Guinea.
- classification : Coronavirus.
- genetics : Coronavirus.
- isolation & purification : Betacoronavirus, Coronavirus.
- veterinary : Coronavirus Infections, Pneumonia, Viral.
- virology : Chiroptera, Coronavirus Infections, Pneumonia, Viral, Zoonoses.
- Animals, Biodiversity, Female, Genome, Viral, Humans, Male, Pandemics, Phylogeny, Pilot Projects.

Abstract

Zoonoses can constitute a threat for public health that can have a global importance, as seen with the current COVID-19 pandemic of severe acute respiratory syndrome coronavirus (SARS-CoV2). Bats have been recognized as an important reservoir of zoonotic coronaviruses (CoVs). In West Africa, where there is a high diversity of bat species, little is known on the circulation of CoVs in these hosts, especially at the interface with human populations. In this study, in Guinea, we tested a total of 319 bats belonging to 14 genera and six families of insectivorous and frugivorous bats across the country, for the presence of coronaviruses. We found CoVs in 35 (11%) of the tested bats-in three insectivorous bat species and five fruit bat species that were mostly captured close to human habitat. Positivity rates varied from 5.7% to 100%, depending on bat species. A wide diversity of alpha and beta coronaviruses was found across the country, including three sequences belonging to SarbeCoVs and MerbeCoVs subgenera known to harbor highly pathogenic human coronaviruses. Our findings suggest that CoVs are widely spread in West Africa and their circulation should be assessed to evaluate the risk of exposure of potential zoonotic CoVs to humans.

DOI: 10.3390/v12080855
PubMed: 32764506
PubMed Central: PMC7472279

Affiliations:

Links toward previous steps (curation, corpus...)

to stream Main, to step Corpus: 000689
to stream Main, to step Curation: 000689

Le document en format XML

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<author><name sortKey="De Nys, Helene" sort="De Nys, Helene" uniqKey="De Nys H" first="Hélène" last="De Nys">Hélène De Nys</name>
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<affiliation wicri:level="1"><nlm:affiliation>CIRAD, UMR ASTRE, Harare, Zimbabwe.</nlm:affiliation>
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<author><name sortKey="Diallo, Ramadan" sort="Diallo, Ramadan" uniqKey="Diallo R" first="Ramadan" last="Diallo">Ramadan Diallo</name>
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<author><name sortKey="Toure, Abdoulaye" sort="Toure, Abdoulaye" uniqKey="Toure A" first="Abdoulaye" last="Toure">Abdoulaye Toure</name>
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<affiliation wicri:level="1"><nlm:affiliation>Institut National de Sante Publique (INSP), Conakry BP6623, Guinea.</nlm:affiliation>
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<author><name sortKey="Goumou, Souana" sort="Goumou, Souana" uniqKey="Goumou S" first="Souana" last="Goumou">Souana Goumou</name>
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<author><name sortKey="Soumah, Abdoul Karim" sort="Soumah, Abdoul Karim" uniqKey="Soumah A" first="Abdoul Karim" last="Soumah">Abdoul Karim Soumah</name>
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<author><name sortKey="Povogui, Moriba" sort="Povogui, Moriba" uniqKey="Povogui M" first="Moriba" last="Povogui">Moriba Povogui</name>
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<author><name sortKey="Koivogui, Joel" sort="Koivogui, Joel" uniqKey="Koivogui J" first="Joel" last="Koivogui">Joel Koivogui</name>
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<author><name sortKey="Monemou, Jean Louis" sort="Monemou, Jean Louis" uniqKey="Monemou J" first="Jean-Louis" last="Monemou">Jean-Louis Monemou</name>
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<author><name sortKey="Raulino, Raisa" sort="Raulino, Raisa" uniqKey="Raulino R" first="Raisa" last="Raulino">Raisa Raulino</name>
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<author><name sortKey="Nkuba, Antoine" sort="Nkuba, Antoine" uniqKey="Nkuba A" first="Antoine" last="Nkuba">Antoine Nkuba</name>
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<affiliation><nlm:affiliation>Institut National de Recherche Biomédicale and Service de Microbiologie, Cliniques Universitaires de Kinshasa, Gombe, Kinshasa P.O. Box 1197, Democratic Republic of the Congo.</nlm:affiliation>
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</affiliation>
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<author><name sortKey="Foulongne, Vincent" sort="Foulongne, Vincent" uniqKey="Foulongne V" first="Vincent" last="Foulongne">Vincent Foulongne</name>
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<author><name sortKey="Delaporte, Eric" sort="Delaporte, Eric" uniqKey="Delaporte E" first="Eric" last="Delaporte">Eric Delaporte</name>
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<author><name sortKey="Ayouba, Ahidjo" sort="Ayouba, Ahidjo" uniqKey="Ayouba A" first="Ahidjo" last="Ayouba">Ahidjo Ayouba</name>
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<author><name sortKey="Peeters, Martine" sort="Peeters, Martine" uniqKey="Peeters M" first="Martine" last="Peeters">Martine Peeters</name>
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<sourceDesc><biblStruct><analytic><title xml:lang="en">Wide Diversity of Coronaviruses in Frugivorous and Insectivorous Bat Species: A Pilot Study in Guinea, West Africa.</title>
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<country xml:lang="fr">Guinée</country>
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<author><name sortKey="Thaurignac, Guillaume" sort="Thaurignac, Guillaume" uniqKey="Thaurignac G" first="Guillaume" last="Thaurignac">Guillaume Thaurignac</name>
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<author><name sortKey="Esteban, Amandine" sort="Esteban, Amandine" uniqKey="Esteban A" first="Amandine" last="Esteban">Amandine Esteban</name>
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<country xml:lang="fr">France</country>
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<author><name sortKey="De Nys, Helene" sort="De Nys, Helene" uniqKey="De Nys H" first="Hélène" last="De Nys">Hélène De Nys</name>
<affiliation wicri:level="3"><nlm:affiliation>ASTRE, CIRAD, INRA, University of Montpellier, 34398 Montpellier, France.</nlm:affiliation>
<country xml:lang="fr">France</country>
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<settlement type="city">Montpellier</settlement>
</placeName>
</affiliation>
<affiliation wicri:level="1"><nlm:affiliation>CIRAD, UMR ASTRE, Harare, Zimbabwe.</nlm:affiliation>
<country xml:lang="fr">Zimbabwe</country>
<wicri:regionArea>CIRAD, UMR ASTRE, Harare</wicri:regionArea>
<wicri:noRegion>Harare</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Diallo, Ramadan" sort="Diallo, Ramadan" uniqKey="Diallo R" first="Ramadan" last="Diallo">Ramadan Diallo</name>
<affiliation wicri:level="1"><nlm:affiliation>Laboratoire Central de Diagnostic Vétérinaire, Ministère de l'Elevage et des Productions Animales, Conakry BP3982, Guinea.</nlm:affiliation>
<country xml:lang="fr">Guinée</country>
<wicri:regionArea>Laboratoire Central de Diagnostic Vétérinaire, Ministère de l'Elevage et des Productions Animales, Conakry BP3982</wicri:regionArea>
<wicri:noRegion>Conakry BP3982</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Toure, Abdoulaye" sort="Toure, Abdoulaye" uniqKey="Toure A" first="Abdoulaye" last="Toure">Abdoulaye Toure</name>
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<country xml:lang="fr">France</country>
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</placeName>
</affiliation>
<affiliation wicri:level="1"><nlm:affiliation>Centre de Recherche et de Formation en Infectiologie de Guinée (CERFIG), Université Gamal Abder Nasser de Conakry, Conakry BP6629, Guinea.</nlm:affiliation>
<country xml:lang="fr">Guinée</country>
<wicri:regionArea>Centre de Recherche et de Formation en Infectiologie de Guinée (CERFIG), Université Gamal Abder Nasser de Conakry, Conakry BP6629</wicri:regionArea>
<wicri:noRegion>Conakry BP6629</wicri:noRegion>
</affiliation>
<affiliation wicri:level="1"><nlm:affiliation>Institut National de Sante Publique (INSP), Conakry BP6623, Guinea.</nlm:affiliation>
<country xml:lang="fr">Guinée</country>
<wicri:regionArea>Institut National de Sante Publique (INSP), Conakry BP6623</wicri:regionArea>
<wicri:noRegion>Conakry BP6623</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Goumou, Souana" sort="Goumou, Souana" uniqKey="Goumou S" first="Souana" last="Goumou">Souana Goumou</name>
<affiliation wicri:level="1"><nlm:affiliation>Centre de Recherche et de Formation en Infectiologie de Guinée (CERFIG), Université Gamal Abder Nasser de Conakry, Conakry BP6629, Guinea.</nlm:affiliation>
<country xml:lang="fr">Guinée</country>
<wicri:regionArea>Centre de Recherche et de Formation en Infectiologie de Guinée (CERFIG), Université Gamal Abder Nasser de Conakry, Conakry BP6629</wicri:regionArea>
<wicri:noRegion>Conakry BP6629</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Soumah, Abdoul Karim" sort="Soumah, Abdoul Karim" uniqKey="Soumah A" first="Abdoul Karim" last="Soumah">Abdoul Karim Soumah</name>
<affiliation wicri:level="1"><nlm:affiliation>Centre de Recherche et de Formation en Infectiologie de Guinée (CERFIG), Université Gamal Abder Nasser de Conakry, Conakry BP6629, Guinea.</nlm:affiliation>
<country xml:lang="fr">Guinée</country>
<wicri:regionArea>Centre de Recherche et de Formation en Infectiologie de Guinée (CERFIG), Université Gamal Abder Nasser de Conakry, Conakry BP6629</wicri:regionArea>
<wicri:noRegion>Conakry BP6629</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Povogui, Moriba" sort="Povogui, Moriba" uniqKey="Povogui M" first="Moriba" last="Povogui">Moriba Povogui</name>
<affiliation wicri:level="1"><nlm:affiliation>Centre de Recherche et de Formation en Infectiologie de Guinée (CERFIG), Université Gamal Abder Nasser de Conakry, Conakry BP6629, Guinea.</nlm:affiliation>
<country xml:lang="fr">Guinée</country>
<wicri:regionArea>Centre de Recherche et de Formation en Infectiologie de Guinée (CERFIG), Université Gamal Abder Nasser de Conakry, Conakry BP6629</wicri:regionArea>
<wicri:noRegion>Conakry BP6629</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Koivogui, Joel" sort="Koivogui, Joel" uniqKey="Koivogui J" first="Joel" last="Koivogui">Joel Koivogui</name>
<affiliation wicri:level="1"><nlm:affiliation>Centre de Recherche et de Formation en Infectiologie de Guinée (CERFIG), Université Gamal Abder Nasser de Conakry, Conakry BP6629, Guinea.</nlm:affiliation>
<country xml:lang="fr">Guinée</country>
<wicri:regionArea>Centre de Recherche et de Formation en Infectiologie de Guinée (CERFIG), Université Gamal Abder Nasser de Conakry, Conakry BP6629</wicri:regionArea>
<wicri:noRegion>Conakry BP6629</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Monemou, Jean Louis" sort="Monemou, Jean Louis" uniqKey="Monemou J" first="Jean-Louis" last="Monemou">Jean-Louis Monemou</name>
<affiliation wicri:level="1"><nlm:affiliation>Centre de Recherche et de Formation en Infectiologie de Guinée (CERFIG), Université Gamal Abder Nasser de Conakry, Conakry BP6629, Guinea.</nlm:affiliation>
<country xml:lang="fr">Guinée</country>
<wicri:regionArea>Centre de Recherche et de Formation en Infectiologie de Guinée (CERFIG), Université Gamal Abder Nasser de Conakry, Conakry BP6629</wicri:regionArea>
<wicri:noRegion>Conakry BP6629</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Raulino, Raisa" sort="Raulino, Raisa" uniqKey="Raulino R" first="Raisa" last="Raulino">Raisa Raulino</name>
<affiliation wicri:level="3"><nlm:affiliation>TransVIHMI, Institut de Recherche pour le Développement, University of Montpellier, INSERM, 34394 Montpellier, France.</nlm:affiliation>
<country xml:lang="fr">France</country>
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<region type="old region" nuts="2">Languedoc-Roussillon</region>
<settlement type="city">Montpellier</settlement>
</placeName>
</affiliation>
</author>
<author><name sortKey="Nkuba, Antoine" sort="Nkuba, Antoine" uniqKey="Nkuba A" first="Antoine" last="Nkuba">Antoine Nkuba</name>
<affiliation wicri:level="3"><nlm:affiliation>TransVIHMI, Institut de Recherche pour le Développement, University of Montpellier, INSERM, 34394 Montpellier, France.</nlm:affiliation>
<country xml:lang="fr">France</country>
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<region type="old region" nuts="2">Languedoc-Roussillon</region>
<settlement type="city">Montpellier</settlement>
</placeName>
</affiliation>
<affiliation><nlm:affiliation>Institut National de Recherche Biomédicale and Service de Microbiologie, Cliniques Universitaires de Kinshasa, Gombe, Kinshasa P.O. Box 1197, Democratic Republic of the Congo.</nlm:affiliation>
<wicri:noCountry code="subField">Democratic Republic of the Congo</wicri:noCountry>
</affiliation>
</author>
<author><name sortKey="Foulongne, Vincent" sort="Foulongne, Vincent" uniqKey="Foulongne V" first="Vincent" last="Foulongne">Vincent Foulongne</name>
<affiliation wicri:level="3"><nlm:affiliation>Département de bacteriologie-virologie, CHU de Montpellier, 34295 Montpellier, France.</nlm:affiliation>
<country xml:lang="fr">France</country>
<wicri:regionArea>Département de bacteriologie-virologie, CHU de Montpellier, 34295 Montpellier</wicri:regionArea>
<placeName><region type="region" nuts="2">Occitanie (région administrative)</region>
<region type="old region" nuts="2">Languedoc-Roussillon</region>
<settlement type="city">Montpellier</settlement>
</placeName>
</affiliation>
</author>
<author><name sortKey="Delaporte, Eric" sort="Delaporte, Eric" uniqKey="Delaporte E" first="Eric" last="Delaporte">Eric Delaporte</name>
<affiliation wicri:level="3"><nlm:affiliation>TransVIHMI, Institut de Recherche pour le Développement, University of Montpellier, INSERM, 34394 Montpellier, France.</nlm:affiliation>
<country xml:lang="fr">France</country>
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<region type="old region" nuts="2">Languedoc-Roussillon</region>
<settlement type="city">Montpellier</settlement>
</placeName>
</affiliation>
</author>
<author><name sortKey="Ayouba, Ahidjo" sort="Ayouba, Ahidjo" uniqKey="Ayouba A" first="Ahidjo" last="Ayouba">Ahidjo Ayouba</name>
<affiliation wicri:level="3"><nlm:affiliation>TransVIHMI, Institut de Recherche pour le Développement, University of Montpellier, INSERM, 34394 Montpellier, France.</nlm:affiliation>
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<region type="old region" nuts="2">Languedoc-Roussillon</region>
<settlement type="city">Montpellier</settlement>
</placeName>
</affiliation>
</author>
<author><name sortKey="Peeters, Martine" sort="Peeters, Martine" uniqKey="Peeters M" first="Martine" last="Peeters">Martine Peeters</name>
<affiliation wicri:level="3"><nlm:affiliation>TransVIHMI, Institut de Recherche pour le Développement, University of Montpellier, INSERM, 34394 Montpellier, France.</nlm:affiliation>
<country xml:lang="fr">France</country>
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<region type="old region" nuts="2">Languedoc-Roussillon</region>
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</placeName>
</affiliation>
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<series><title level="j">Viruses</title>
<idno type="eISSN">1999-4915</idno>
<imprint><date when="2020" type="published">2020</date>
</imprint>
</series>
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<profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Animals (MeSH)</term>
<term>Betacoronavirus (isolation & purification)</term>
<term>Biodiversity (MeSH)</term>
<term>Chiroptera (virology)</term>
<term>Coronavirus (classification)</term>
<term>Coronavirus (genetics)</term>
<term>Coronavirus (isolation & purification)</term>
<term>Coronavirus Infections (veterinary)</term>
<term>Coronavirus Infections (virology)</term>
<term>Female (MeSH)</term>
<term>Genome, Viral (MeSH)</term>
<term>Guinea (MeSH)</term>
<term>Humans (MeSH)</term>
<term>Male (MeSH)</term>
<term>Pandemics (MeSH)</term>
<term>Phylogeny (MeSH)</term>
<term>Pilot Projects (MeSH)</term>
<term>Pneumonia, Viral (veterinary)</term>
<term>Pneumonia, Viral (virology)</term>
<term>Zoonoses (virology)</term>
</keywords>
<keywords scheme="KwdFr" xml:lang="fr"><term>Animaux (MeSH)</term>
<term>Betacoronavirus (isolement et purification)</term>
<term>Biodiversité (MeSH)</term>
<term>Chiroptera (virologie)</term>
<term>Coronavirus (classification)</term>
<term>Coronavirus (génétique)</term>
<term>Coronavirus (isolement et purification)</term>
<term>Femelle (MeSH)</term>
<term>Guinée (MeSH)</term>
<term>Génome viral (MeSH)</term>
<term>Humains (MeSH)</term>
<term>Infections à coronavirus (médecine vétérinaire)</term>
<term>Infections à coronavirus (virologie)</term>
<term>Mâle (MeSH)</term>
<term>Pandémies (MeSH)</term>
<term>Phylogenèse (MeSH)</term>
<term>Pneumopathie virale (médecine vétérinaire)</term>
<term>Pneumopathie virale (virologie)</term>
<term>Projets pilotes (MeSH)</term>
<term>Zoonoses (virologie)</term>
</keywords>
<keywords scheme="MESH" type="geographic" xml:lang="en"><term>Guinea</term>
</keywords>
<keywords scheme="MESH" qualifier="classification" xml:lang="en"><term>Coronavirus</term>
</keywords>
<keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>Coronavirus</term>
</keywords>
<keywords scheme="MESH" qualifier="génétique" xml:lang="fr"><term>Coronavirus</term>
</keywords>
<keywords scheme="MESH" qualifier="isolation & purification" xml:lang="en"><term>Betacoronavirus</term>
<term>Coronavirus</term>
</keywords>
<keywords scheme="MESH" qualifier="isolement et purification" xml:lang="fr"><term>Betacoronavirus</term>
<term>Coronavirus</term>
</keywords>
<keywords scheme="MESH" qualifier="médecine vétérinaire" xml:lang="fr"><term>Infections à coronavirus</term>
<term>Pneumopathie virale</term>
</keywords>
<keywords scheme="MESH" qualifier="veterinary" xml:lang="en"><term>Coronavirus Infections</term>
<term>Pneumonia, Viral</term>
</keywords>
<keywords scheme="MESH" qualifier="virologie" xml:lang="fr"><term>Chiroptera</term>
<term>Infections à coronavirus</term>
<term>Pneumopathie virale</term>
<term>Zoonoses</term>
</keywords>
<keywords scheme="MESH" qualifier="virology" xml:lang="en"><term>Chiroptera</term>
<term>Coronavirus Infections</term>
<term>Pneumonia, Viral</term>
<term>Zoonoses</term>
</keywords>
<keywords scheme="MESH" xml:lang="en"><term>Animals</term>
<term>Biodiversity</term>
<term>Female</term>
<term>Genome, Viral</term>
<term>Humans</term>
<term>Male</term>
<term>Pandemics</term>
<term>Phylogeny</term>
<term>Pilot Projects</term>
</keywords>
<keywords scheme="MESH" xml:lang="fr"><term>Animaux</term>
<term>Biodiversité</term>
<term>Coronavirus</term>
<term>Femelle</term>
<term>Guinée</term>
<term>Génome viral</term>
<term>Humains</term>
<term>Mâle</term>
<term>Pandémies</term>
<term>Phylogenèse</term>
<term>Projets pilotes</term>
</keywords>
<keywords scheme="Wicri" type="geographic" xml:lang="fr"><term>Guinée</term>
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<front><div type="abstract" xml:lang="en">Zoonoses can constitute a threat for public health that can have a global importance, as seen with the current COVID-19 pandemic of severe acute respiratory syndrome coronavirus (SARS-CoV2). Bats have been recognized as an important reservoir of zoonotic coronaviruses (CoVs). In West Africa, where there is a high diversity of bat species, little is known on the circulation of CoVs in these hosts, especially at the interface with human populations. In this study, in Guinea, we tested a total of 319 bats belonging to 14 genera and six families of insectivorous and frugivorous bats across the country, for the presence of coronaviruses. We found CoVs in 35 (11%) of the tested bats-in three insectivorous bat species and five fruit bat species that were mostly captured close to human habitat. Positivity rates varied from 5.7% to 100%, depending on bat species. A wide diversity of alpha and beta coronaviruses was found across the country, including three sequences belonging to SarbeCoVs and MerbeCoVs subgenera known to harbor highly pathogenic human coronaviruses. Our findings suggest that CoVs are widely spread in West Africa and their circulation should be assessed to evaluate the risk of exposure of potential zoonotic CoVs to humans.</div>
</front>
</TEI>
<pubmed><MedlineCitation Status="MEDLINE" Owner="NLM"><PMID Version="1">32764506</PMID>
<DateCompleted><Year>2020</Year>
<Month>09</Month>
<Day>09</Day>
</DateCompleted>
<DateRevised><Year>2020</Year>
<Month>09</Month>
<Day>09</Day>
</DateRevised>
<Article PubModel="Electronic"><Journal><ISSN IssnType="Electronic">1999-4915</ISSN>
<JournalIssue CitedMedium="Internet"><Volume>12</Volume>
<Issue>8</Issue>
<PubDate><Year>2020</Year>
<Month>08</Month>
<Day>05</Day>
</PubDate>
</JournalIssue>
<Title>Viruses</Title>
<ISOAbbreviation>Viruses</ISOAbbreviation>
</Journal>
<ArticleTitle>Wide Diversity of Coronaviruses in Frugivorous and Insectivorous Bat Species: A Pilot Study in Guinea, West Africa.</ArticleTitle>
<ELocationID EIdType="pii" ValidYN="Y">E855</ELocationID>
<ELocationID EIdType="doi" ValidYN="Y">10.3390/v12080855</ELocationID>
<Abstract><AbstractText>Zoonoses can constitute a threat for public health that can have a global importance, as seen with the current COVID-19 pandemic of severe acute respiratory syndrome coronavirus (SARS-CoV2). Bats have been recognized as an important reservoir of zoonotic coronaviruses (CoVs). In West Africa, where there is a high diversity of bat species, little is known on the circulation of CoVs in these hosts, especially at the interface with human populations. In this study, in Guinea, we tested a total of 319 bats belonging to 14 genera and six families of insectivorous and frugivorous bats across the country, for the presence of coronaviruses. We found CoVs in 35 (11%) of the tested bats-in three insectivorous bat species and five fruit bat species that were mostly captured close to human habitat. Positivity rates varied from 5.7% to 100%, depending on bat species. A wide diversity of alpha and beta coronaviruses was found across the country, including three sequences belonging to SarbeCoVs and MerbeCoVs subgenera known to harbor highly pathogenic human coronaviruses. Our findings suggest that CoVs are widely spread in West Africa and their circulation should be assessed to evaluate the risk of exposure of potential zoonotic CoVs to humans.</AbstractText>
</Abstract>
<AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Lacroix</LastName>
<ForeName>Audrey</ForeName>
<Initials>A</Initials>
<Identifier Source="ORCID">0000-0001-5879-9386</Identifier>
<AffiliationInfo><Affiliation>TransVIHMI, Institut de Recherche pour le Développement, University of Montpellier, INSERM, 34394 Montpellier, France.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Vidal</LastName>
<ForeName>Nicole</ForeName>
<Initials>N</Initials>
<AffiliationInfo><Affiliation>TransVIHMI, Institut de Recherche pour le Développement, University of Montpellier, INSERM, 34394 Montpellier, France.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Keita</LastName>
<ForeName>Alpha K</ForeName>
<Initials>AK</Initials>
<AffiliationInfo><Affiliation>TransVIHMI, Institut de Recherche pour le Développement, University of Montpellier, INSERM, 34394 Montpellier, France.</Affiliation>
</AffiliationInfo>
<AffiliationInfo><Affiliation>Centre de Recherche et de Formation en Infectiologie de Guinée (CERFIG), Université Gamal Abder Nasser de Conakry, Conakry BP6629, Guinea.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Thaurignac</LastName>
<ForeName>Guillaume</ForeName>
<Initials>G</Initials>
<AffiliationInfo><Affiliation>TransVIHMI, Institut de Recherche pour le Développement, University of Montpellier, INSERM, 34394 Montpellier, France.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Esteban</LastName>
<ForeName>Amandine</ForeName>
<Initials>A</Initials>
<AffiliationInfo><Affiliation>TransVIHMI, Institut de Recherche pour le Développement, University of Montpellier, INSERM, 34394 Montpellier, France.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>De Nys</LastName>
<ForeName>Hélène</ForeName>
<Initials>H</Initials>
<Identifier Source="ORCID">0000-0002-2942-4531</Identifier>
<AffiliationInfo><Affiliation>ASTRE, CIRAD, INRA, University of Montpellier, 34398 Montpellier, France.</Affiliation>
</AffiliationInfo>
<AffiliationInfo><Affiliation>CIRAD, UMR ASTRE, Harare, Zimbabwe.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Diallo</LastName>
<ForeName>Ramadan</ForeName>
<Initials>R</Initials>
<AffiliationInfo><Affiliation>Laboratoire Central de Diagnostic Vétérinaire, Ministère de l'Elevage et des Productions Animales, Conakry BP3982, Guinea.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Toure</LastName>
<ForeName>Abdoulaye</ForeName>
<Initials>A</Initials>
<AffiliationInfo><Affiliation>TransVIHMI, Institut de Recherche pour le Développement, University of Montpellier, INSERM, 34394 Montpellier, France.</Affiliation>
</AffiliationInfo>
<AffiliationInfo><Affiliation>Centre de Recherche et de Formation en Infectiologie de Guinée (CERFIG), Université Gamal Abder Nasser de Conakry, Conakry BP6629, Guinea.</Affiliation>
</AffiliationInfo>
<AffiliationInfo><Affiliation>Institut National de Sante Publique (INSP), Conakry BP6623, Guinea.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Goumou</LastName>
<ForeName>Souana</ForeName>
<Initials>S</Initials>
<AffiliationInfo><Affiliation>Centre de Recherche et de Formation en Infectiologie de Guinée (CERFIG), Université Gamal Abder Nasser de Conakry, Conakry BP6629, Guinea.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Soumah</LastName>
<ForeName>Abdoul Karim</ForeName>
<Initials>AK</Initials>
<AffiliationInfo><Affiliation>Centre de Recherche et de Formation en Infectiologie de Guinée (CERFIG), Université Gamal Abder Nasser de Conakry, Conakry BP6629, Guinea.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Povogui</LastName>
<ForeName>Moriba</ForeName>
<Initials>M</Initials>
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Wide Diversity of Coronaviruses in Frugivorous and Insectivorous Bat Species: A Pilot Study in Guinea, West Africa.

Wide Diversity of Coronaviruses in Frugivorous and Insectivorous Bat Species: A Pilot Study in Guinea, West Africa.

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